Comparative restriction enzymes analysis of rat chromosomal DNA in vitro and in silico
// Ovchinnikov bulletin of biotechnology and physical and chemical biology , V.2, No 3, p. 39-46 (2006). (In Russian)
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Pvu II
| Enzyme name | Pvu II | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Prototype | PvuII | ||||||||||||
| SKU | SE-E111 | ||||||||||||
| Turbo version | Available | ||||||||||||
| High-concentration version | Not available | ||||||||||||
| Restriction type | Type IIPiType IIP enzymes are classical Type II restriction enzymes with palindromic recognition sequences and symmetric cleavage sites. | ||||||||||||
| Recognition site | 5'… CAG▼CTG …3' 3'… GTC▲GAC …5' |
||||||||||||
| Source | An E.coli strain that carries the cloned Pvu II gene from Proteus vulgaris | ||||||||||||
| Optimal buffer | SE-buffer G (10 mM Tris-HCl (pH 7.6 at 25°C); 10 mM MgCl2; 50 mM NaCl; 1 mM DTT.) | ||||||||||||
| Optimal temperature | 37 °C | ||||||||||||
| Inactivation temperature | 80 °C | ||||||||||||
| Buffer activity |
|
||||||||||||
| Unit definition | One unit of the enzyme is the amount required to hydrolyze 1 μg of Lambda DNA in 1 hour at 37°C in a total reaction volume of 50 μl. | ||||||||||||
| Assayed on | Lambda DNA | ||||||||||||
| Storage conditions | 10 mM Tris-HCl (pH 7.5); 300 mM NaCl; 0,1 mM EDTA; 1 mM DTT; 100 μg/ml BSA; 50% glycerol. Store at -20°C. | ||||||||||||
| Ligation | After 10-fold overdigestion with enzyme approximately 70% of the DNA fragments can be ligated and recut. | ||||||||||||
| Nonspecific hydrolysis | No nonspecific activity was detected after incubation of 1 μg of Lambda DNA with 10 u.a. of enzyme for 16 hours at 37°C. | ||||||||||||
| Methylation sensitivity | not tested | ||||||||||||
| Reagents supplied with enzyme | 10 X SE-buffer G, BSA | ||||||||||||
| Notes | High enzyme concentration may result in star activity. To obtain 100% activity, BSA should be added to the 1 reaction mix to a final concentration of 100 μg/ml. Do not use BSA for long incubation. | ||||||||||||
| References |
Nothing found. |
Pvu II
| Enzyme name | Pvu II | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Prototype | PvuII | ||||||||||||
| SKU | SE-E111 | ||||||||||||
| Turbo version | Available | ||||||||||||
| High-concentration version | Not available | ||||||||||||
| Restriction type | Type IIPiType IIP enzymes are classical Type II restriction enzymes with palindromic recognition sequences and symmetric cleavage sites. | ||||||||||||
| Recognition site | 5'… CAG▼CTG …3' 3'… GTC▲GAC …5' |
||||||||||||
| Source | An E.coli strain that carries the cloned Pvu II gene from Proteus vulgaris | ||||||||||||
| Optimal buffer | SE-buffer G (10 mM Tris-HCl (pH 7.6 at 25°C); 10 mM MgCl2; 50 mM NaCl; 1 mM DTT.) | ||||||||||||
| Optimal temperature | 37 °C | ||||||||||||
| Inactivation temperature | 80 °C | ||||||||||||
| Buffer activity |
|
||||||||||||
| Unit definition | One unit of the enzyme is the amount required to hydrolyze 1 μg of Lambda DNA in 1 hour at 37°C in a total reaction volume of 50 μl. | ||||||||||||
| Assayed on | Lambda DNA | ||||||||||||
| Storage conditions | 10 mM Tris-HCl (pH 7.5); 300 mM NaCl; 0,1 mM EDTA; 1 mM DTT; 100 μg/ml BSA; 50% glycerol. Store at -20°C. | ||||||||||||
| Ligation | After 10-fold overdigestion with enzyme approximately 70% of the DNA fragments can be ligated and recut. | ||||||||||||
| Nonspecific hydrolysis | No nonspecific activity was detected after incubation of 1 μg of Lambda DNA with 10 u.a. of enzyme for 16 hours at 37°C. | ||||||||||||
| Methylation sensitivity | not tested | ||||||||||||
| Reagents supplied with enzyme | 10 X SE-buffer G, BSA | ||||||||||||
| Notes | High enzyme concentration may result in star activity. To obtain 100% activity, BSA should be added to the 1 reaction mix to a final concentration of 100 μg/ml. Do not use BSA for long incubation. | ||||||||||||
| References |
Nothing found. |
Isoschizomers and neoschizomers
| SE enzyme | Recognition site | Known analogs | Type | Recognition site |
|---|---|---|---|---|
5'… GACGT▼C …3' 3'… C▲TGCAG …5' | Neoschizomer | 5'… GAC▼GTC …3' 3'… CTG▲CAG …5' | ||
5'… TGC▼GCA …3' 3'… ACG▲CGT …5' | AviII FspI MstI NsbI | Isoschizomer | 5'… TGC▼GCA …3' 3'… ACG▲CGT …5' | |
5'… ACCTGC(N)4▼ …3' 3'… TGGACG(N)8▲ …5' | BfuAI BspMI BveI | Isoschizomer | 5'… ACCTGC(N)4▼ …3' 3'… TGGACG(N)8▲ …5' | |
5'… G▼GTACC …3' 3'… CCATG▲G …5' | Asp718I | Isoschizomer | 5'… G▼GTACC …3' 3'… CCATG▲G …5' | |
| Neoschizomer | 5'… GGTAC▼C …3' 3'… C▲CATGG …5' | |||
5'… G▼GYRCC …3' 3'… CCRYG▲G …5' | BanI BshNI BspT107I HgiCI | Isoschizomer | 5'… G▼GYRCC …3' 3'… CCRYG▲G …5' | |
5'… CCANNNN▼NTGG …3' 3'… GGTN▲NNNNACC …5' | PflBI PflMI Van91I | Isoschizomer | 5'… CCANNNN▼NTGG …3' 3'… GGTN▲NNNNACC …5' | |
5'… GAG▼CGG …3' 3'… CTC▲GCC …5' | BsrBI MbiI | Isoschizomer | 5'… GAG▼CGG …3' 3'… CTC▲GCC …5' | |
5'… AA▼CGTT …3' 3'… TTGC▲AA …5' | Psp1406I | Isoschizomer | 5'… AA▼CGTT …3' 3'… TTGC▲AA …5' | |
5'… GGATC(N)4▼ …3' 3'… CCTAG(N)5▲ …5' | AlwI BinI BspPI | Isoschizomer | 5'… GGATC(N)4▼ …3' 3'… CCTAG(N)5▲ …5' | |
5'… Y▼GGCCR …3' 3'… RCCGG▲Y …5' | CfrI EaeI | Isoschizomer | 5'… Y▼GGCCR …3' 3'… RCCGG▲Y …5' | |
5'… R▼AATTY …3' 3'… YTTAA▲R …5' | ApoI XapI | Isoschizomer | 5'… R▼AATTY …3' 3'… YTTAA▲R …5' | |
5'… CTGAAG(N)16▼ …3' 3'… GACTTC(N)14▲ …5' | Eco57I | Isoschizomer | 5'… CTGAAG(N)16▼ …3' 3'… GACTTC(N)14▲ …5' | |
5'… AGC▼GCT …3' 3'… TCG▲CGA …5' | Aor51HI Eco47III FunI | Isoschizomer | 5'… AGC▼GCT …3' 3'… TCG▲CGA …5' | |
5'… A▼CTAGT …3' 3'… TGATC▲A …5' | BcuI SpeI | Isoschizomer | 5'… A▼CTAGT …3' 3'… TGATC▲A …5' | |
5'… ▼CCWGG …3' 3'… GGWCC▲ …5' | EcoRII PspGI | Isoschizomer | 5'… ▼CCWGG …3' 3'… GGWCC▲ …5' | |
| Neoschizomer | 5'… CC▼WGG …3' 3'… GGW▲CC …5' | |||
5'… C▼YCGRG …3' 3'… GRGCY▲C …5' | AvaI BsiHKCI BsoBI Eco88I NspIII | Isoschizomer | 5'… C▼YCGRG …3' 3'… GRGCY▲C …5' | |
5'… GGGCC▼C …3' 3'… C▲CCGGG …5' | Bsp120I | Neoschizomer | 5'… G▼GGCCC …3' 3'… CCCGG▲G …5' | |
5'… A▼CCGGT …3' 3'… TGGCC▲A …5' | AgeI BshTI CspAI PinAI | Isoschizomer | 5'… A▼CCGGT …3' 3'… TGGCC▲A …5' | |
5'… GCGAT▼CGC …3' 3'… CGC▲TAGCG …5' | SgfI | Isoschizomer | 5'… GCGAT▼CGC …3' 3'… CGC▲TAGCG …5' | |
5'… C▼CTAGG …3' 3'… GGATC▲C …5' | AvrII BlnI XmaJI | Isoschizomer | 5'… C▼CTAGG …3' 3'… GGATC▲C …5' | |
5'… GCG▼C …3' 3'… C▲GCG …5' | CfoI HhaI | Isoschizomer | 5'… GCG▼C …3' 3'… C▲GCG …5' | |
| Neoschizomer | 5'… G▼CGC …3' 3'… CGC▲G …5' | |||
5'… G▼GNCC …3' 3'… CCNG▲G …5' | AsuI Cfr13I PspPI Sau96I | Isoschizomer | 5'… G▼GNCC …3' 3'… CCNG▲G …5' | |
5'… CC▼SGG …3' 3'… GGS▲CC …5' | BcnI CauII NciI | Isoschizomer | 5'… CC▼SGG …3' 3'… GGS▲CC …5' | |
5'… GGTGA(N)8▼ …3' 3'… CCACT(N)7▲ …5' | HphI | Isoschizomer | 5'… GGTGA(N)8▼ …3' 3'… CCACT(N)7▲ …5' | |
5'… G▼CTAGC …3' 3'… CGATC▲G …5' | NheI | Isoschizomer | 5'… G▼CTAGC …3' 3'… CGATC▲G …5' | |
| Neoschizomer | 5'… GCTAG▼C …3' 3'… C▲GATCG …5' | |||
5'… GWGCW▼C …3' 3'… C▲WCGWG …5' | Alw21I BsiHKAI HgiAI | Isoschizomer | 5'… GWGCW▼C …3' 3'… C▲WCGWG …5' | |
5'… G▼GWCC …3' 3'… CCWG▲G …5' | AvaII Eco47I SinI VpaK11BI | Isoschizomer | 5'… G▼GWCC …3' 3'… CCWG▲G …5' | |
5'… ACTGGG(N)5▼ …3' 3'… TGACCC(N)4▲ …5' | BfiI BmrI | Isoschizomer | 5'… ACTGGG(N)5▼ …3' 3'… TGACCC(N)4▲ …5' | |
5'… CTGGAG(N)16▼ …3' 3'… GACCTC(N)14▲ …5' | GsuI | Isoschizomer | 5'… CTGGAG(N)16▼ …3' 3'… GACCTC(N)14▲ …5' | |
5'… TT▼CGAA …3' 3'… AAGC▲TT …5' | AsuII Bsp119I BspT104I BstBI Csp45I NspV SfuI | Isoschizomer | 5'… TT▼CGAA …3' 3'… AAGC▲TT …5' | |
5'… AT▼CGAT …3' 3'… TAGC▲TA …5' | BanIII BseCI BspDI BspXI Bsu15I BsuTUI ClaI ZhoI | Isoschizomer | 5'… AT▼CGAT …3' 3'… TAGC▲TA …5' | |
5'… CCNNNNN▼NNGG …3' 3'… GGNN▲NNNNNCC …5' | BseLI BsiYI BslI | Isoschizomer | 5'… CCNNNNN▼NNGG …3' 3'… GGNN▲NNNNNCC …5' | |
5'… ACTGGN▼ …3' 3'… TGAC▲CN …5' | BseNI BsrI BsrSI | Isoschizomer | 5'… ACTGGN▼ …3' 3'… TGAC▲CN …5' | |
5'… GCAATGNN▼ …3' 3'… CGTTAC▲NN …5' | BseMI BsrDI | Isoschizomer | 5'… GCAATGNN▼ …3' 3'… CGTTAC▲NN …5' | |
5'… GATNN▼NNATC …3' 3'… CTANN▲NNTAG …5' | BsaBI BseJI MamI | Isoschizomer | 5'… GATNN▼NNATC …3' 3'… CTANN▲NNTAG …5' | |
5'… CC▼TNAGG …3' 3'… GGANT▲CC …5' | AxyI Bsu36I Eco81I SauI | Isoschizomer | 5'… CC▼TNAGG …3' 3'… GGANT▲CC …5' | |
5'… R▼CCGGY …3' 3'… YGGCC▲R …5' | BsrFI BssAI Cfr10I | Isoschizomer | 5'… R▼CCGGY …3' 3'… YGGCC▲R …5' | |
5'… G▼CGCGC …3' 3'… CGCGC▲G …5' | BssHII PauI | Isoschizomer | 5'… G▼CGCGC …3' 3'… CGCGC▲G …5' | |
5'… C▼GGCCG …3' 3'… GCCGG▲C …5' | BstZI EagI EclXI Eco52I XmaIII | Isoschizomer | 5'… C▼GGCCG …3' 3'… GCCGG▲C …5' | |
5'… GGGAC(N)10▼ …3' 3'… CCCTG(N)14▲ …5' | BsmFI FaqI | Isoschizomer | 5'… GGGAC(N)10▼ …3' 3'… CCCTG(N)14▲ …5' | |
5'… GGTCTCN▼ …3' 3'… CCAGAG(N)5▲ …5' | BsaI BspTNI Eco31I | Isoschizomer | 5'… GGTCTCN▼ …3' 3'… CCAGAG(N)5▲ …5' | |
5'… T▼CCGGA …3' 3'… AGGCC▲T …5' | AccIII Aor13HI BlfI BseAI BspEI BspMII Kpn2I MroI | Isoschizomer | 5'… T▼CCGGA …3' 3'… AGGCC▲T …5' | |
5'… C▼CATGG …3' 3'… GGTAC▲C …5' | NcoI | Isoschizomer | 5'… C▼CATGG …3' 3'… GGTAC▲C …5' | |
5'… GC▼TNAGC …3' 3'… CGANT▲CG …5' | BlpI Bpu1102I CelII EspI | Isoschizomer | 5'… GC▼TNAGC …3' 3'… CGANT▲CG …5' | |
5'… C▼CGC …3' 3'… GGC▲G …5' | AciI SsiI | Isoschizomer | 5'… C▼CGC …3' 3'… GGC▲G …5' | |
5'… C▼CNNGG …3' 3'… GGNNC▲C …5' | BsaJI BseDI SecI | Isoschizomer | 5'… C▼CNNGG …3' 3'… GGNNC▲C …5' | |
5'… GTA▼TAC …3' 3'… CAT▲ATG …5' | Bst1107I BstZ17I | Isoschizomer | 5'… GTA▼TAC …3' 3'… CAT▲ATG …5' | |
5'… C▼CWWGG …3' 3'… GGWWC▲C …5' | Eco130I EcoT14I StyI | Isoschizomer | 5'… C▼CWWGG …3' 3'… GGWWC▲C …5' | |
5'… C▼TCGTG …3' 3'… GAGCA▲C …5' | BauI BsiI BssSI | Isoschizomer | 5'… C▼TCGTG …3' 3'… GAGCA▲C …5' | |
5'… ACN▼GT …3' 3'… TG▲NCA …5' | HpyCH4III TaaI Tsp4CI | Isoschizomer | 5'… ACN▼GT …3' 3'… TG▲NCA …5' | |
5'… CTCTTCN▼ …3' 3'… GAGAAG(N)4▲ …5' | Eam1104I EarI Ksp632I | Isoschizomer | 5'… CTCTTCN▼ …3' 3'… GAGAAG(N)4▲ …5' | |
5'… GR▼CGYC …3' 3'… CYGC▲RG …5' | AcyI BsaHI Hin1I Hsp92I | Isoschizomer | 5'… GR▼CGYC …3' 3'… CYGC▲RG …5' | |
5'… C▼TTAAG …3' 3'… GAATT▲C …5' | AflII BfrI BspTI Bst98I MspCI | Isoschizomer | 5'… C▼TTAAG …3' 3'… GAATT▲C …5' | |
5'… GCANNNN▼NTGC …3' 3'… CGTN▲NNNNACG …5' | ApaBI | Neoschizomer | 5'… GCANNNNN▼TGC …3' 3'… CGT▲NNNNNACG …5' | |
5'… T▼GTACA …3' 3'… ACATG▲T …5' | Bsp1407I BsrGI SspBI | Isoschizomer | 5'… T▼GTACA …3' 3'… ACATG▲T …5' | |
5'… YAC▼GTR …3' 3'… RTG▲CAY …5' | BsaAI | Isoschizomer | 5'… YAC▼GTR …3' 3'… RTG▲CAY …5' | |
5'… GCN▼NGC …3' 3'… CGN▲NCG …5' | Cac8I | Isoschizomer | 5'… GCN▼NGC …3' 3'… CGN▲NCG …5' | |
5'… C▼TNAG …3' 3'… GANT▲C …5' | DdeI HpyF3I | Isoschizomer | 5'… C▼TNAG …3' 3'… GANT▲C …5' | |
5'… C▼CRYGG …3' 3'… GGYRC▲C …5' | BtgI DsaI | Isoschizomer | 5'… C▼CRYGG …3' 3'… GGYRC▲C …5' | |
5'… CCTNN▼NNNAGG …3' 3'… GGANNN▲NNTCC …5' | EcoNI XagI | Isoschizomer | 5'… CCTNN▼NNNAGG …3' 3'… GGANNN▲NNTCC …5' | |
5'… GGATGNN▼ …3' 3'… CCTAC▲NN …5' | BseGI | Isoschizomer | 5'… GGATGNN▼ …3' 3'… CCTAC▲NN …5' | |
| Neoschizomer | 5'… GGATG(N)9▼ …3' 3'… CCTAC(N)13▲ …5' | |||
5'… CG▼CG …3' 3'… GC▲GC …5' | AccII Bsh1236I BstUI FnuDII MvnI | Isoschizomer | 5'… CG▼CG …3' 3'… GC▲GC …5' | |
5'… RGCGC▼Y …3' 3'… Y▲CGCGR …5' | Bsp143II HaeII | Isoschizomer | 5'… RGCGC▼Y …3' 3'… Y▲CGCGR …5' | |
5'… GAT▼C …3' 3'… C▲TAG …5' | Neoschizomer | 5'… ▼GATC …3' 3'… CTAG▲ …5' | ||
5'… G(mA)▼TC …3' 3'… CT▲(mA)G …5' | DpnI | Isoschizomer | 5'… G(mA)▼TC …3' 3'… CT▲(mA)G …5' | |
5'… GTCTCN▼ …3' 3'… CAGAG(N)5▲ …5' | Alw26I BsmAI | Isoschizomer | 5'… GTCTCN▼ …3' 3'… CAGAG(N)5▲ …5' | |
5'… CGRY▼CG …3' 3'… GC▲YRGC …5' | Bsh1285I BsiEI McrI | Isoschizomer | 5'… CGRY▼CG …3' 3'… GC▲YRGC …5' | |
5'… GCNNNNN▼NNGC …3' 3'… CGNN▲NNNNNCG …5' | HpyF10VI MwoI | Isoschizomer | 5'… GCNNNNN▼NNGC …3' 3'… CGNN▲NNNNNCG …5' | |
5'… RCATG▼Y …3' 3'… Y▲GTACR …5' | NspI XceI | Isoschizomer | 5'… RCATG▼Y …3' 3'… Y▲GTACR …5' | |
5'… GACNN▼NNGTC …3' 3'… CTGNN▲NNCAG …5' | BoxI PshAI | Isoschizomer | 5'… GACNN▼NNGTC …3' 3'… CTGNN▲NNCAG …5' | |
5'… ▼CCNGG …3' 3'… GGNCC▲ …5' | BssKI StyD4I | Isoschizomer | 5'… ▼CCNGG …3' 3'… GGNCC▲ …5' | |
| Neoschizomer | 5'… CC▼NGG …3' 3'… GGN▲CC …5' | |||
5'… C▼TRYAG …3' 3'… GAYRT▲C …5' | BfmI BpcI SfcI SfeI | Isoschizomer | 5'… C▼TRYAG …3' 3'… GAYRT▲C …5' | |
5'… TAC▼GTA …3' 3'… ATG▲CAT …5' | Eco105I SnaBI | Isoschizomer | 5'… TAC▼GTA …3' 3'… ATG▲CAT …5' | |
5'… GCAGC(N)8▼ …3' 3'… CGTCG(N)12▲ …5' | BbvI BseXI | Isoschizomer | 5'… GCAGC(N)8▼ …3' 3'… CGTCG(N)12▲ …5' | |
5'… GAAGAC(N)2▼ …3' 3'… CTTCTG(N)6▲ …5' | BbsI BbvII BpiI BpuAI | Isoschizomer | 5'… GAAGAC(N)2▼ …3' 3'… CTTCTG(N)6▲ …5' | |
5'… R▼GATCY …3' 3'… YCTAG▲R …5' | BstYI MflI PsuI XhoII | Isoschizomer | 5'… R▼GATCY …3' 3'… YCTAG▲R …5' | |
5'… GTATCC(N)6▼ …3' 3'… CATAGG(N)5▲ …5' | BciVI | Isoschizomer | 5'… GTATCC(N)6▼ …3' 3'… CATAGG(N)5▲ …5' | |
5'… GG▼CC …3' 3'… CC▲GG …5' | BshFI BspANI PhoI | Isoschizomer | 5'… GG▼CC …3' 3'… CC▲GG …5' | |
5'… CAC▼GTC …3' 3'… GTG▲CAG …5' | BmgBI | Isoschizomer | 5'… CAC▼GTC …3' 3'… GTG▲CAG …5' | |
5'… GC▼GGCCGC …3' 3'… CGCCGG▲CG …5' | NotI | Isoschizomer | 5'… GC▼GGCCGC …3' 3'… CGCCGG▲CG …5' | |
5'… TTT▼AAA …3' 3'… AAA▲TTT …5' | AhaIII | Isoschizomer | 5'… TTT▼AAA …3' 3'… AAA▲TTT …5' | |
5'… CACNNN▼GTG …3' 3'… GTG▲NNNCAC …5' | AdeI | Isoschizomer | 5'… CACNNN▼GTG …3' 3'… GTG▲NNNCAC …5' | |
5'… GACNNN▼NNGTC …3' 3'… CTGNN▲NNNCAG …5' | AhdI AspEI Eam1105I EclHKI | Isoschizomer | 5'… GACNNN▼NNGTC …3' 3'… CTGNN▲NNNCAG …5' | |
5'… GACNNNN▼NNGTC …3' 3'… CTGNN▲NNNNCAG …5' | AasI DrdI | Isoschizomer | 5'… GACNNNN▼NNGTC …3' 3'… CTGNN▲NNNNCAG …5' | |
5'… GAG▼CTC …3' 3'… CTC▲GAG …5' | Ecl136II | Isoschizomer | 5'… GAG▼CTC …3' 3'… CTC▲GAG …5' | |
| Neoschizomer | 5'… GAGCT▼C …3' 3'… C▲TCGAG …5' | |||
5'… G▼AATTC …3' 3'… CTTAA▲G …5' | FunII | Isoschizomer | 5'… G▼AATTC …3' 3'… CTTAA▲G …5' | |
5'… GAT▼ATC …3' 3'… CTA▲TAG …5' | Eco32I | Isoschizomer | 5'… GAT▼ATC …3' 3'… CTA▲TAG …5' | |
5'… GGC▼GCC …3' 3'… CCG▲CGG …5' | EheI SfoI | Isoschizomer | 5'… GGC▼GCC …3' 3'… CCG▲CGG …5' | |
BbeI | Neoschizomer | 5'… GGCGC▼C …3' 3'… C▲CGCGG …5' | ||
KasI | Neoschizomer | 5'… G▼GCGCC …3' 3'… CCGCG▲G …5' | ||
NarI | Neoschizomer | 5'… GG▼CGCC …3' 3'… CCGC▲GG …5' | ||
5'… CATG▼ …3' 3'… ▲GTAC …5' | Hin1II Hsp92II NlaIII | Isoschizomer | 5'… CATG▼ …3' 3'… ▲GTAC …5' | |
CviAII | Neoschizomer | 5'… C▼ATG …3' 3'… GTA▲C …5' | ||
| Neoschizomer | 5'… ▼CATG …3' 3'… GTAC▲ …5' | |||
5'… CCCGC(N)4▼ …3' 3'… GGGCG(N)6▲ …5' | SmuI | Isoschizomer | 5'… CCCGC(N)4▼ …3' 3'… GGGCG(N)6▲ …5' | |
5'… CA▼TATG …3' 3'… GTAT▲AC …5' | NdeI | Isoschizomer | 5'… CA▼TATG …3' 3'… GTAT▲AC …5' | |
5'… GT▼mKAC …3' 3'… CAKm▲TG …5' | AccI XmiI | Isoschizomer | 5'… GT▼mKAC …3' 3'… CAKm▲TG …5' | |
5'… GGATGNN▼ …3' 3'… CCTAC▲NN …5' | Neoschizomer | 5'… GGATG(N)9▼ …3' 3'… CCTAC(N)13▲ …5' | ||
BseGI | Neoschizomer | 5'… GGATGNN▼ …3' 3'… CCTAC▲NN …5' | ||
5'… GRGCY▼C …3' 3'… C▲YCGRG …5' | BanII Eco24I EcoT38I HgiJII | Isoschizomer | 5'… GRGCY▼C …3' 3'… C▲YCGRG …5' | |
5'… GC▼NGC …3' 3'… CGN▲CG …5' | Fnu4HI ItaI SatI | Isoschizomer | 5'… GC▼NGC …3' 3'… CGN▲CG …5' | |
5'… GACGC(N)5▼ …3' 3'… CTGCG(N)10▲ …5' | CseI | Isoschizomer | 5'… GACGC(N)5▼ …3' 3'… CTGCG(N)10▲ …5' | |
5'… GTY▼RAC …3' 3'… CAR▲YTG …5' | HincII | Isoschizomer | 5'… GTY▼RAC …3' 3'… CAR▲YTG …5' | |
5'… GTT▼AAC …3' 3'… CAA▲TTG …5' | KspAI | Isoschizomer | 5'… GTT▼AAC …3' 3'… CAA▲TTG …5' | |
5'… C▼CGG …3' 3'… GGC▲C …5' | BsiSI HapII | Isoschizomer | 5'… C▼CGG …3' 3'… GGC▲C …5' | |
5'… A▼CGT …3' 3'… TGC▲A …5' | MaeII | Isoschizomer | 5'… A▼CGT …3' 3'… TGC▲A …5' | |
5'… T▼GATCA …3' 3'… ACTAG▲T …5' | BclI FbaI | Isoschizomer | 5'… T▼GATCA …3' 3'… ACTAG▲T …5' | |
5'… A▼CCWGGT …3' 3'… TGGWCC▲A …5' | SexAI | Isoschizomer | 5'… A▼CCWGGT …3' 3'… TGGWCC▲A …5' | |
5'… C▼AATTG …3' 3'… GTTAA▲C …5' | MunI | Isoschizomer | 5'… C▼AATTG …3' 3'… GTTAA▲C …5' | |
5'… GDGCH▼C …3' 3'… C▲HCGDG …5' | Bsp1286I SduI | Isoschizomer | 5'… GDGCH▼C …3' 3'… C▲HCGDG …5' | |
5'… TGG▼CCA …3' 3'… ACC▲GGT …5' | BalI MlsI MluNI MscI Msp20I | Isoschizomer | 5'… TGG▼CCA …3' 3'… ACC▲GGT …5' | |
5'… G▼CCGGC …3' 3'… CGGCC▲G …5' | NgoMIV | Isoschizomer | 5'… G▼CCGGC …3' 3'… CGGCC▲G …5' | |
NaeI | Neoschizomer | 5'… GCC▼GGC …3' 3'… CGG▲CCG …5' | ||
PdiI | Neoschizomer | 5'… GCC▼GGC …3' 3'… CGG▲CCG …5' | ||
5'… GAANN▼NNTTC …3' 3'… CTTNN▲NNAAG …5' | Asp700I PdmI XmnI | Isoschizomer | 5'… GAANN▼NNTTC …3' 3'… CTTNN▲NNAAG …5' | |
5'… CmG▼CKG …3' 3'… GKC▲GmC …5' | NspBII | Isoschizomer | 5'… CmG▼CKG …3' 3'… GKC▲GmC …5' | |
5'… TCG▼CGA …3' 3'… AGC▲GCT …5' | Bsp68I | Isoschizomer | 5'… TCG▼CGA …3' 3'… AGC▲GCT …5' | |
5'… GG▼CGCGCC …3' 3'… CCGCGC▲GG …5' | AscI AsoI SgsI | Isoschizomer | 5'… GG▼CGCGCC …3' 3'… CCGCGC▲GG …5' | |
5'… AGG▼CCT …3' 3'… TCC▲GGA …5' | AatI Eco147I SseBI StuI | Isoschizomer | 5'… AGG▼CCT …3' 3'… TCC▲GGA …5' | |
5'… A▼CATGT …3' 3'… TGTAC▲A …5' | BspLU11I PscI | Isoschizomer | 5'… A▼CATGT …3' 3'… TGTAC▲A …5' | |
5'… GCTCTTCN▼ …3' 3'… CGAGAAG(N)4▲ …5' | LguI SapI | Isoschizomer | 5'… GCTCTTCN▼ …3' 3'… CGAGAAG(N)4▲ …5' | |
5'… GAATGCN▼ …3' 3'… CTTAC▲GN …5' | BsaMI BsmI Mva1269I | Isoschizomer | 5'… GAATGCN▼ …3' 3'… CTTAC▲GN …5' | |
5'… CGAT▼CG …3' 3'… GC▲TAGC …5' | MvrI PvuI | Isoschizomer | 5'… CGAT▼CG …3' 3'… GC▲TAGC …5' | |
5'… GAGTC(N)4▼ …3' 3'… CTCAG(N)5▲ …5' | PleI | Isoschizomer | 5'… GAGTC(N)4▼ …3' 3'… CTCAG(N)5▲ …5' | |
MlyI | Neoschizomer | 5'… GAGTC(N)5▼ …3' 3'… CTCAG(N)5▲ …5' | ||
SchI | Neoschizomer | 5'… GAGTC(N)5▼ …3' 3'… CTCAG(N)5▲ …5' | ||
5'… GGTCTC(N)1▼ …3' 3'… CCAGAG(N)5▲ …5' | Eco31I | Isoschizomer | 5'… GGTCTC(N)1▼ …3' 3'… CCAGAG(N)5▲ …5' | |
5'… CAC▼GTG …3' 3'… GTG▲CAC …5' | AcvI BbrPI Eco72I PmaCI PmlI | Isoschizomer | 5'… CAC▼GTG …3' 3'… GTG▲CAC …5' | |
5'… G▼GTNACC …3' 3'… CCANTG▲G …5' | BstEII BstPI Eco91I EcoO65I | Isoschizomer | 5'… G▼GTNACC …3' 3'… CCANTG▲G …5' | |
5'… C▼GTACG …3' 3'… GCATG▲C …5' | BsiWI Pfl23II SplI SunI | Isoschizomer | 5'… C▼GTACG …3' 3'… GCATG▲C …5' | |
5'… GGN▼NCC …3' 3'… CCN▲NGG …5' | BspLI NlaIV | Isoschizomer | 5'… GGN▼NCC …3' 3'… CCN▲NGG …5' | |
5'… RG▼GWCCY …3' 3'… YCCWG▲GR …5' | PpuMI PpuXI Psp5II | Isoschizomer | 5'… RG▼GWCCY …3' 3'… YCCWG▲GR …5' | |
5'… CTGCA▼G …3' 3'… G▲ACGTC …5' | BspMAI | Isoschizomer | 5'… CTGCA▼G …3' 3'… G▲ACGTC …5' | |
5'… CAGNNN▼CTG …3' 3'… GTC▲NNNGAC …5' | AlwNI | Isoschizomer | 5'… CAGNNN▼CTG …3' 3'… GTC▲NNNGAC …5' | |
5'… GGCCGG▼CC …3' 3'… CC▲GGCCGG …5' | FseI | Isoschizomer | 5'… GGCCGG▼CC …3' 3'… CC▲GGCCGG …5' | |
5'… GT▼AC …3' 3'… CA▲TG …5' | AfaI | Isoschizomer | 5'… GT▼AC …3' 3'… CA▲TG …5' | |
Csp6I | Neoschizomer | 5'… G▼TAC …3' 3'… CAT▲G …5' | ||
5'… CG▼GWCCG …3' 3'… GCCWG▲GC …5' | CpoI CspI RsrII | Isoschizomer | 5'… CG▼GWCCG …3' 3'… GCCWG▲GC …5' | |
5'… CCTGCA▼GG …3' 3'… GG▲ACGTCC …5' | SdaI Sse8387I | Isoschizomer | 5'… CCTGCA▼GG …3' 3'… GG▲ACGTCC …5' | |
5'… GCATC(N)5▼ …3' 3'… CGTAG(N)9▲ …5' | LweI | Isoschizomer | 5'… GCATC(N)5▼ …3' 3'… CGTAG(N)9▲ …5' | |
5'… C▼TCGAG …3' 3'… GAGCT▲C …5' | BssHI PaeR7I SlaI StrI TliI XhoI | Isoschizomer | 5'… C▼TCGAG …3' 3'… GAGCT▲C …5' | |
5'… CCGC▼GG …3' 3'… GG▲CGCC …5' | Cfr42I KspI SacII SgrBI SstII | Isoschizomer | 5'… CCGC▼GG …3' 3'… GG▲CGCC …5' | |
5'… CCC▼GGG …3' 3'… GGG▲CCC …5' | Neoschizomer | 5'… C▼CCGGG …3' 3'… GGGCC▲C …5' | ||
5'… ATTT▼AAAT …3' 3'… TAAA▲TTTA …5' | SwaI | Isoschizomer | 5'… ATTT▼AAAT …3' 3'… TAAA▲TTTA …5' | |
5'… CAYNN▼NNRTG …3' 3'… GTRNN▲NNYAC …5' | MslI | Isoschizomer | 5'… CAYNN▼NNRTG …3' 3'… GTRNN▲NNYAC …5' | |
5'… GCATG▼C …3' 3'… C▲GTACG …5' | BbuI PaeI SpaHI | Isoschizomer | 5'… GCATG▼C …3' 3'… C▲GTACG …5' | |
5'… ▼AATT …3' 3'… TTAA▲ …5' | TasI Tsp509I TspEI | Isoschizomer | 5'… ▼AATT …3' 3'… TTAA▲ …5' | |
5'… C▼TAG …3' 3'… GAT▲C …5' | MaeI | Isoschizomer | 5'… C▼TAG …3' 3'… GAT▲C …5' | |
5'… T▼TAA …3' 3'… AAT▲T …5' | MseI Tru1I | Isoschizomer | 5'… T▼TAA …3' 3'… AAT▲T …5' | |
5'… ▼GTSAC …3' 3'… CASTG▲ …5' | Tsp45I | Isoschizomer | 5'… ▼GTSAC …3' 3'… CASTG▲ …5' | |
5'… GACN▼NNGTC …3' 3'… CTGNN▲NCAG …5' | AspI PflFI PsyI TelI | Isoschizomer | 5'… GACN▼NNGTC …3' 3'… CTGNN▲NCAG …5' | |
5'… G▼TGCAC …3' 3'… CACGT▲G …5' | Alw44I ApaLI | Isoschizomer | 5'… G▼TGCAC …3' 3'… CACGT▲G …5' | |
5'… AT▼TAAT …3' 3'… TAAT▲TA …5' | AseI PshBI | Isoschizomer | 5'… AT▼TAAT …3' 3'… TAAT▲TA …5' | |
5'… AGT▼ACT …3' 3'… TCA▲TGA …5' | AssI ScaI | Isoschizomer | 5'… AGT▼ACT …3' 3'… TCA▲TGA …5' | |
5'… ATGCA▼T …3' 3'… T▲ACGTA …5' | EcoT22I Mph1103I NsiI | Isoschizomer | 5'… ATGCA▼T …3' 3'… T▲ACGTA …5' | |
BfrBI | Neoschizomer | 5'… ATGCA▼T …3' 3'… T▲ACGTA …5' |